Package: gwid
Type: Package
Title: Genome-Wide Identity-by-Descent
Version: 0.3.0
Authors@R: c(
    person("Soroush", "Mahmoudiandehkordi", email = "soroushmdg@gmail.com", role = c("aut", "cre")),
    person("Steven J", "Schrodi", email = "schrodi@wisc.edu", role = "aut"),
    person("Mehdi", "Maadooliat", email = "mehdi.maadooliat@mu.edu", role = "aut")
    )
Maintainer: Soroush Mahmoudiandehkordi <soroushmdg@gmail.com>
Description: Methods and tools for the analysis of Genome Wide
        Identity-by-Descent ('gwid') mapping data, focusing on testing
        whether there is a higher occurrence of Identity-By-Descent
        (IBD) segments around potential causal variants in cases
        compared to controls, which is crucial for identifying rare
        variants. To enhance its analytical power, 'gwid' incorporates
        a Sliding Window Approach, allowing for the detection and
        analysis of signals from multiple Single Nucleotide
        Polymorphisms (SNPs).
License: MIT + file LICENSE
Encoding: UTF-8
biocViews:
Imports: data.table, gdsfmt, SNPRelate, Matrix, ggplot2, plotly, utils,
        stats, RcppRoll, methods, piggyback, shiny, lattice, grid
RoxygenNote: 7.3.1
Suggests: knitr, magrittr, rmarkdown, testthat (>= 3.0.0)
Config/testthat/edition: 3
URL: https://github.com/soroushmdg/gwid,
        https://soroushmdg.github.io/gwid/
BugReports: https://github.com/soroushmdg/gwid/issues
Config/pak/sysreqs: cmake git make libicu-dev libuv1-dev libssl-dev
        zlib1g-dev
Repository: https://soroushmdg.r-universe.dev
Date/Publication: 2024-09-09 13:31:46 UTC
RemoteUrl: https://github.com/soroushmdg/gwid
RemoteRef: HEAD
RemoteSha: e41964717004239c34a7a3e0bfb00f2e656c0b93
NeedsCompilation: no
Packaged: 2026-10-11 09:16:38 UTC; root
Author: Soroush Mahmoudiandehkordi [aut, cre],
  Steven J Schrodi [aut],
  Mehdi Maadooliat [aut]
Depends: R (>= 4.1.0)